HDInterval - Highest (Posterior) Density Intervals

A generic function and a set of methods to calculate highest density intervals for a variety of classes of objects which can specify a probability density distribution, including MCMC output, fitted density objects, and functions.

Last updated 2 years ago

6.80 score 49 dependents 936 scripts 6.6k downloads

wiqid - Quick and Dirty Estimates for Wildlife Populations

Provides simple, fast functions for maximum likelihood and Bayesian estimates of wildlife population parameters, suitable for use with simulated data or bootstraps. Early versions were indeed quick and dirty, but optional error-checking routines and meaningful error messages have been added. Includes single and multi-season occupancy, closed capture population estimation, survival, species richness and distance measures.

Last updated 2 years ago

4.84 score 2 stars 1 dependents 115 scripts 610 downloads

mcmcOutput - Functions to Store, Manipulate and Display Markov Chain Monte Carlo (MCMC) Output

Implements a class ('mcmcOutput') for efficiently storing and handling Markov chain Monte Carlo (MCMC) output, intended as an aid for those writing customized MCMC samplers. A range of constructor methods are provided covering common output formats. Functions are provided to generate summary and diagnostic statistics and to display histograms or density plots of posterior distributions, for the entire output, or subsets of draws, nodes, or parameters.

Last updated 2 years ago

4.74 score 4 stars 2 dependents 46 scripts 396 downloads